CLC Sequence Viewer
Trusted Mac download CLC Sequence Viewer 6 6.6.2. Virus-free and 100% clean download. Get CLC Sequence Viewer 6 alternative downloads.
How to: View the 3D structure of a protein
- Article Snippet: Protein sequence alignment and phylogenetic analysis The protein sequence alignments between GP5 sequences of VR2332, NADC9, NADC30, SDSU73, Mosaic 1 and Mosaic 2 and phylogenetic tree were evaluated using CLC Sequence Viewer 8.0 (QIAGEN). Techniques: Sequencing.
- CLC Sequence Viewer 7.0.2 is an application offered by the software company CLC bio A/S. Some users try to remove it. This can be troublesome because uninstalling this by hand requires some knowledge regarding Windows internal functioning.
- SnapGene and SnapGene Viewer can read.clc DNA and protein sequence files created by CLC Bio. Shown below is an example of a CLC Bio.clc file viewed with the original program and with SnapGene.
Starting with...
A PDB CODE (e.g. 1B8G)
- Go to the Structure Home Page.
- Enter the PDB code in the search box and press the Go button.
- Click a structure image to access its record page
- Scroll to the molecular graphic section and click on the spin icon to load an interactive view of the structure within the web page. Alternatively, click on the launch icon to open the advanced (full feature) version of iCn3D, NCBI's web-based 3D structure viewer, in a separate window.
A PDB-FORMAT FILE THAT IS NOT IN PDB
- Try out the new interactive 3D structure viewer, iCn3D.
- Click 'File' and select 'Open File' > 'PDB File'.
- Select the file, and click 'Load'.
- The 3D view of the structure you have uploaded will now be displayed.
A PROTEIN ACCESSION NUMBER (e.g. NP_000240) OR SEQUENCE
- Use the Finding a Structural Template guide to find the most appropriate PDB structure.
- Continue with step 1 under 'a PDB code' above.
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